View & Download File Final Processed Spectrum For CD0004556000
Bovine Collagen Type II (collagen alpha-1(ii) chain)
Citation: Jose L.S. Lopes, Andrew J. Miles, Lee Whitmore, B.A. Wallace 2014 Protein Science 23 1765-1772
Citation: The PCDDB (protein circular dichroism data bank): A bioinformatics resource for protein characterisations and methods development.
Ramalli SG, Miles AJ, Janes RW, Wallace BA., J Mol Biol (2022)
Generic coll_urea_56000.gen
Date 2013-03-02T00:00:00
Experiment collagen in urea
Code col
Low Wavelength 198
High Wavelength 280
Interval (nm) 0.5
Cut off (nm) 198
Machine ASTRID
Dwell time (s) 2
Accumulations 3
Cell ID ak-2
Pathlength (cm) 0.00131
Concentration (mg/ml) 1
Cut off (nm) 198
Smoothing window 17
Temperature 25
M.R.W. (Da) 94.6
Calibration file csa_020313_8am.gen
Units DE(c192::c290)
Zeroed between 263 270
Baselines aarch00015.d01::aarch00015.d02::aarch00015.d03::aarch00015.d04
Samples aarch00016.d01::aarch00016.d02::aarch00016.d03::aarch00016.d04
Description collagen in 4M urea
| Column: 1 | Column: 2 | Column: 3 | Column: 4 | Column: 5 | Column: 6 | Column: 7 | Column: 8 |
|---|---|---|---|---|---|---|---|
| 198.5 | -1.66270E+01 | 3.37915E+02 | -1.61139E+01 | 0.00000E+00 | 8.24527E-01 | 4.83864E-02 | |
| 199.5 | -1.68113E+01 | 3.18109E+02 | -1.63614E+01 | 0.00000E+00 | 8.17034E-01 | 2.52495E-01 | |
| 200.5 | -1.57336E+01 | 3.03818E+02 | -1.60777E+01 | 0.00000E+00 | 6.97801E-01 | 1.51245E-01 | |
| 201.5 | -1.55709E+01 | 2.93476E+02 | -1.53645E+01 | 0.00000E+00 | 7.41762E-01 | 1.31347E-01 | |
| 202.5 | -1.40164E+01 | 2.85998E+02 | -1.43998E+01 | 0.00000E+00 | 5.28910E-01 | 1.05816E-01 | |
| 203.5 | -1.32019E+01 | 2.80393E+02 | -1.33137E+01 | 0.00000E+00 | 5.66824E-01 | 9.76658E-02 | |
| 204.5 | -1.19993E+01 | 2.76112E+02 | -1.21368E+01 | 0.00000E+00 | 4.00170E-01 | 5.96141E-02 | |
| 205.5 | -1.10681E+01 | 2.72972E+02 | -1.09017E+01 | 0.00000E+00 | 3.53866E-01 | 1.59376E-01 | |
| 206.5 | -9.53722E+00 | 2.70527E+02 | -9.70200E+00 | 0.00000E+00 | 3.80635E-01 | 1.37234E-01 | |
| 207.5 | -8.48027E+00 | 2.68594E+02 | -8.48620E+00 | 0.00000E+00 | 2.32554E-01 | 6.55394E-02 | |
| 208.5 | -7.36076E+00 | 2.66881E+02 | -7.31806E+00 | 0.00000E+00 | 1.20017E-01 | 1.21370E-02 | |
| 209.5 | -6.14561E+00 | 2.65592E+02 | -6.30497E+00 | 0.00000E+00 | 1.29016E-01 | 6.51897E-02 | |
| 210.5 | -5.32039E+00 | 2.64488E+02 | -5.36120E+00 | 0.00000E+00 | 4.43162E-02 | 1.02901E-01 | |
| 211.5 | -4.25414E+00 | 2.63597E+02 | -4.49225E+00 | 0.00000E+00 | 1.11624E-01 | 7.19711E-02 | |
| 212.5 | -3.95788E+00 | 2.62979E+02 | -3.69420E+00 | 0.00000E+00 | 7.49963E-02 | 1.03422E-01 | |
| 213.5 | -2.88602E+00 | 2.62069E+02 | -3.06499E+00 | 0.00000E+00 | 1.16505E-01 | 7.70632E-02 | |
| 214.5 | -2.51378E+00 | 2.61509E+02 | -2.49356E+00 | 0.00000E+00 | 7.23866E-02 | 5.44072E-02 | |
| 215.5 | -1.95393E+00 | 2.61003E+02 | -2.02387E+00 | 0.00000E+00 | 1.23989E-01 | 1.14603E-01 | |
| 216.5 | -2.03631E+00 | 2.60466E+02 | -1.62341E+00 | 0.00000E+00 | 1.13075E-01 | 7.19246E-02 | |
| 217.5 | -1.10963E+00 | 2.60070E+02 | -1.29260E+00 | 0.00000E+00 | 1.53074E-01 | 2.27789E-02 | |
| 218.5 | -1.09774E+00 | 2.59616E+02 | -9.92817E-01 | 0.00000E+00 | 1.12165E-01 | 7.63288E-02 | |
| 219.5 | -7.39609E-01 | 2.59245E+02 | -7.93272E-01 | 0.00000E+00 | 1.55255E-01 | 1.11742E-01 | |
| 220.5 | -4.63212E-01 | 2.58895E+02 | -6.63960E-01 | 0.00000E+00 | 1.62755E-01 | 1.07248E-01 | |
| 221.5 | -7.69661E-01 | 2.58585E+02 | -6.45372E-01 | 0.00000E+00 | 1.10471E-01 | 8.21284E-02 | |
| 222.5 | -9.37904E-01 | 2.58297E+02 | -6.61914E-01 | 0.00000E+00 | 2.01625E-01 | 8.51199E-02 | |
| 223.5 | -7.11349E-01 | 2.58106E+02 | -7.45108E-01 | 0.00000E+00 | 1.34862E-01 | 7.12058E-02 | |
| 224.5 | -7.17360E-01 | 2.57945E+02 | -7.80426E-01 | 0.00000E+00 | 1.29045E-01 | 8.22422E-02 | |
| 225.5 | -1.02539E+00 | 2.57596E+02 | -7.39938E-01 | 0.00000E+00 | 8.79356E-02 | 1.05636E-01 | |
| 226.5 | -7.80038E-01 | 2.57465E+02 | -7.66251E-01 | 0.00000E+00 | 1.62450E-01 | 1.20926E-01 | |
| 227.5 | -5.98017E-01 | 2.57347E+02 | -7.87481E-01 | 0.00000E+00 | 1.17038E-01 | 1.29236E-01 | |
| 228.5 | -7.81049E-01 | 2.57168E+02 | -8.10979E-01 | 0.00000E+00 | 1.37595E-01 | 5.55944E-02 | |
| 229.5 | -1.02069E+00 | 2.57009E+02 | -8.64934E-01 | 0.00000E+00 | 8.47010E-02 | 1.17357E-01 | |
| 230.5 | -6.35805E-01 | 2.56826E+02 | -9.47007E-01 | 0.00000E+00 | 1.18412E-01 | 4.63526E-02 | |
| 231.5 | -1.18038E+00 | 2.56796E+02 | -1.01683E+00 | 0.00000E+00 | 3.85715E-02 | 1.36666E-01 | |
| 232.5 | -1.03903E+00 | 2.56669E+02 | -1.06865E+00 | 0.00000E+00 | 1.05627E-01 | 1.00213E-01 | |
| 233.5 | -1.07430E+00 | 2.56580E+02 | -1.09473E+00 | 0.00000E+00 | 2.74233E-02 | 3.47466E-02 | |
| 234.5 | -9.75428E-01 | 2.56511E+02 | -1.13468E+00 | 0.00000E+00 | 5.52083E-02 | 8.13790E-02 | |
| 235.5 | -1.28612E+00 | 2.56422E+02 | -1.04997E+00 | 0.00000E+00 | 1.20998E-01 | 1.51503E-01 | |
| 236.5 | -1.00807E+00 | 2.56279E+02 | -1.04767E+00 | 0.00000E+00 | 1.09044E-01 | 1.14681E-01 | |
| 237.5 | -1.11402E+00 | 2.56262E+02 | -1.01325E+00 | 0.00000E+00 | 1.27083E-01 | 6.45499E-02 | |
| 238.5 | -1.09622E+00 | 2.56128E+02 | -9.66746E-01 | 0.00000E+00 | 5.63829E-02 | 4.11534E-02 | |
| 239.5 | -1.10645E+00 | 2.55916E+02 | -9.18743E-01 | 0.00000E+00 | 3.03089E-02 | 9.04095E-02 | |
| 240.5 | -9.04002E-01 | 2.55903E+02 | -9.50614E-01 | 0.00000E+00 | 6.90064E-02 | 4.55407E-02 | |
| 241.5 | -7.39429E-01 | 2.55937E+02 | -9.37135E-01 | 0.00000E+00 | 7.22833E-02 | 3.86554E-02 | |
| 242.5 | -1.07170E+00 | 2.55758E+02 | -8.59909E-01 | 0.00000E+00 | 7.88190E-02 | 5.11315E-02 | |
| 243.5 | -7.88372E-01 | 2.55676E+02 | -7.96970E-01 | 0.00000E+00 | 1.41318E-01 | 5.61644E-02 | |
| 244.5 | -6.73940E-01 | 2.55605E+02 | -7.58794E-01 | 0.00000E+00 | 5.10011E-02 | 1.04145E-01 | |
| 245.5 | -5.76411E-01 | 2.55542E+02 | -6.88018E-01 | 0.00000E+00 | 7.56420E-02 | 4.52595E-02 | |
| 246.5 | -7.42200E-01 | 2.55329E+02 | -5.84460E-01 | 0.00000E+00 | 5.44351E-02 | 6.26322E-02 | |
| 247.5 | -5.70287E-01 | 2.55206E+02 | -5.65133E-01 | 0.00000E+00 | 4.38079E-02 | 8.25581E-02 | |
| 248.5 | -4.82605E-01 | 2.55003E+02 | -5.26297E-01 | 0.00000E+00 | 5.43158E-02 | 9.25809E-02 | |
| 249.5 | -4.24163E-01 | 2.55010E+02 | -4.39337E-01 | 0.00000E+00 | 5.12538E-02 | 1.24049E-01 | |
| 250.5 | -3.08267E-01 | 2.54938E+02 | -3.54108E-01 | 0.00000E+00 | 5.38263E-02 | 1.06356E-01 | |
| 251.5 | -7.27511E-02 | 2.54782E+02 | -2.71640E-01 | 0.00000E+00 | 5.09169E-02 | 3.23447E-02 | |
| 252.5 | -9.85654E-02 | 2.54656E+02 | -1.77556E-01 | 0.00000E+00 | 5.48289E-02 | 9.68410E-02 | |
| 253.5 | -2.88113E-02 | 2.54372E+02 | -1.65602E-01 | 0.00000E+00 | 2.68206E-02 | 1.57822E-01 | |
| 254.5 | 2.39707E-02 | 2.54377E+02 | -1.74937E-01 | 0.00000E+00 | 4.32322E-02 | 3.47205E-02 | |
| 255.5 | -1.49104E-01 | 2.54122E+02 | -1.84140E-01 | 0.00000E+00 | 6.29127E-02 | 1.10715E-01 | |
| 256.5 | -3.76853E-01 | 2.53999E+02 | -1.62376E-01 | 0.00000E+00 | 8.55609E-02 | 9.86999E-02 | |
| 257.5 | 5.21680E-02 | 2.53912E+02 | -1.43327E-01 | 0.00000E+00 | 4.45086E-02 | 9.07916E-02 | |
| 258.5 | 2.75201E-02 | 2.53734E+02 | -1.29837E-01 | 0.00000E+00 | 1.35541E-01 | 5.98285E-02 | |
| 259.5 | -1.77460E-01 | 2.53589E+02 | -1.06032E-01 | 0.00000E+00 | 5.78697E-02 | 9.36652E-02 | |
| 260.5 | -9.17310E-02 | 2.53358E+02 | -1.11820E-01 | 0.00000E+00 | 1.75312E-01 | 1.14990E-01 | |
| 261.5 | -4.14978E-01 | 2.53300E+02 | -1.32447E-01 | 0.00000E+00 | 9.87005E-02 | 2.89353E-02 | |
| 262.5 | -1.18352E-02 | 2.53180E+02 | -9.15006E-02 | 0.00000E+00 | 7.73469E-02 | 1.22083E-01 | |
| 263.5 | -2.53624E-02 | 2.52920E+02 | -7.42964E-02 | 0.00000E+00 | 1.38513E-01 | 1.56671E-01 | |
| 264.5 | 1.89897E-01 | 2.52739E+02 | -4.31583E-02 | 0.00000E+00 | 8.47565E-02 | 1.18633E-01 | |
| 265.5 | -8.83264E-02 | 2.52586E+02 | 2.50360E-02 | 0.00000E+00 | 7.61706E-02 | 1.16890E-01 | |
| 266.5 | -1.99573E-01 | 2.52427E+02 | 2.60977E-02 | 0.00000E+00 | 4.80123E-02 | 1.68031E-01 | |
| 267.5 | 9.52816E-02 | 2.52250E+02 | 1.59202E-02 | 0.00000E+00 | 8.14369E-02 | 6.98605E-02 | |
| 268.5 | 1.60076E-01 | 2.52072E+02 | -2.38031E-02 | 0.00000E+00 | 2.40723E-02 | 7.70162E-02 | |
| 269.5 | 6.70632E-02 | 2.52011E+02 | 3.94640E-03 | 0.00000E+00 | 1.41215E-01 | 1.87485E-01 | |
| 270.5 | -5.30994E-02 | 2.51870E+02 | 2.29554E-03 | 0.00000E+00 | 2.85658E-02 | 9.73456E-02 | |
| 271.5 | 6.47428E-02 | 2.51659E+02 | 4.20383E-03 | 0.00000E+00 | 8.64984E-02 | 6.98814E-02 | |
| 272.5 | 1.43746E-01 | 2.51645E+02 | 7.82506E-03 | 0.00000E+00 | 1.46060E-01 | 9.41265E-02 | |
| 273.5 | -1.09745E-01 | 2.51404E+02 | 3.70332E-02 | 0.00000E+00 | 8.08874E-02 | 9.91362E-02 | |
| 274.5 | 7.58832E-03 | 2.51279E+02 | 7.25104E-03 | 0.00000E+00 | 1.32760E-01 | 4.82729E-02 | |
| 275.5 | -5.25819E-02 | 2.51057E+02 | -1.76670E-02 | 0.00000E+00 | 4.46308E-02 | 1.01960E-01 | |
| 276.5 | -1.23997E-01 | 2.50952E+02 | -1.23997E-01 | 0.00000E+00 | 4.41837E-02 | 1.06440E-01 | |
| 277.5 | -1.64167E-01 | 2.50762E+02 | -1.64167E-01 | 0.00000E+00 | 1.12826E-01 | 3.05619E-02 | |
| 278.5 | 3.33502E-01 | 2.50668E+02 | 3.33502E-01 | 0.00000E+00 | 1.05113E-01 | 7.15562E-02 | |
| 279.5 | 2.35440E-02 | 2.50494E+02 | 2.35440E-02 | 0.00000E+00 | 5.00617E-02 | 2.92306E-02 | |
| 280.0 | -2.06215E-01 | 2.50449E+02 | -2.06215E-01 | 0.00000E+00 | 9.53544E-02 | 4.01314E-02 | |
At a glance
| Downloads | 714 |
| Depositor | Jose Lopes |
| Uniprot |
P02459 |
| Alpha Fold | |
| PDB |
|
| EC | |
| CATH Class | |
| Protein Type | soluble fibrous |
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